logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000001345_36|CGC23

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000001345_04342
TonB-dependent receptor SusC
TC 1109213 1112302 + 1.B.14.6.1
MGYG000001345_04343
SusD-like protein
TC 1112345 1113808 + 8.A.46.1.5
MGYG000001345_04344
hypothetical protein
null 1113845 1115359 + SusE| SusF_SusE| SusF_SusE
MGYG000001345_04345
hypothetical protein
CAZyme 1115374 1117152 + GH66
MGYG000001345_04346
Oligosaccharide 4-alpha-D-glucosyltransferase
CAZyme 1117189 1119693 + GH31
MGYG000001345_04347
hypothetical protein
CAZyme 1120699 1123269 + GH2
MGYG000001345_04348
HTH-type transcriptional activator RhaR
TF 1123280 1124146 - HTH_AraC+HTH_AraC
MGYG000001345_04349
Sodium/glucose cotransporter
TC 1124305 1125882 + 2.A.21.3.19
MGYG000001345_04350
Beta-1,4-mannooligosaccharide phosphorylase
CAZyme 1125897 1126922 + GH130
MGYG000001345_04351
TonB-dependent receptor SusC
TC 1127147 1130275 + 1.B.14.6.1
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is beta-mannan

Protein ID eCAMI subfam CAZyme substrate
MGYG000001345_04345 GH66_e7|3.2.1.11 alpha-glucan
MGYG000001345_04346 GH31_e60|3.2.1.11|2.4.1.-
MGYG000001345_04347 GH2_e64|3.2.1.25 beta-mannan
MGYG000001345_04350 GH130_e13|2.4.1.- beta-mannan

Substrate predicted by dbCAN-PUL is capsule polysaccharide degradation download this fig


Genomic location